MOLECULAR DOCKING

8 Day Technical Hands-on Certificate Online Training in Molecular Docking | Study to predict interaction energy between molecules

  
MOLECULAR DOCKING

Date

8 - 15 March, 2024.

Venue

Live Trainer- Online session from 11:30 AM - 12:30 PM Australian Eastern Daylight Time /6 AM - 8 AM India Time (CEST -3:30, GMT +5:30).

Fee

Category Price
Fee for Student (Graduate/Master) USD 249
Fee for Student (Graduate/Master) INR 4199
Fee for Student (PhD/MBBS) INR 4999
Fee for Research Scholar/TA/LT INR 5999
Fee for PostDoc/Lecturer/Faculty/Professor INR 6499
Fee for Scientist/Company Professional/Doctor(MS/MD) INR 13999

BDG LifeSciences, operating in India as BDG LifeSciences (OPC) Pvt. Ltd., and in collaboration with BBR PTY LTD. in Australia, is a distinguished bioinformatics company specializing in the facilitation of workshops, training sessions, innovative research projects, and online courses within the realm of bioinformatics technologies. Established in 2010, the company has been actively engaged in the field, holding registrations under the Ministry of MSME (Micro, Small, and Medium Enterprises), Government of India, with the registration number UDYAM-UP-01-0019151. Over the years, BDG LifeSciences has successfully imparted knowledge to a diverse array of participants worldwide, including students, scientists, faculty members, professors, and corporate executives.

To view the pictures of our previous events click here-1 and click here-2To view, the listing of upcoming events kindly click here and our previous workshops can be viewed hereTo view the video feedback of our previous events kindly visit ouYouTube Channel

We have launched our next 8-day Hands-on Technical Certificate workshop in Molecular Docking | Study to predict interaction energy between molecules in which every day 2-hour interactive training session will be conducted to give the user a unique learning experience.Video recording will be provided at the end of the session to give the user a unique learning experience. On successful completion of the course participation certificate will be awarded.
TOPICS
  1. Single ligand
  2. Multi ligands
  3. Protein-Protein docking
  4. Protein-DNA docking
  5. Protein-RNA docking
  6. Protein-peptide docking
  7. Protein-protein conjugate docking
  8. Protein-metal based ligand docking
PRACTICAL APPLICATION

DAY 1- SESSION 1

  • Theory of Molecular Docking
  • Simple docking
  • Installation of softwares
  • MGL tools
  • Autodock vina
  • Visualisation tools
  • I) PYMOL
  • II) ADT
  • III) DSV
  • IV) CHIMERA
  • Downloading protein file from PDB
  • Downloading ligand file from PubChem

DAY 2- SESSION 2

  • Preparation of protein in ADT
  • Preparation of ligand in Pymol
  • Minimization of Ligand in Chimera
  • Conversion of ligand to pdbqt in ADT
  • Preparation of configuration file
  • Execution of command
  • Analysis of docking results by 3 different tools
  • Generation of paper publication-quality images and data analysis

DAY 3- SESSION 3- HDOCK

  • protein-protein docking
  • protein-DNA docking
  • protein-RNA docking

DAY 4- SESSION 4- HEX

  • Protein-protein docking
  • Protein preparation
  • Docking by HEX
  • Analysis by visualization and generation of publication quality images.

DAY 5- SESSION 5- MULTI-LIGAND AUTODOCK

  • Preparation of protein
  • Creating SDF files of ligand

DAY 6- SESSION 6- MULTI-LIGAND DOCKING

  • Obabel for conversion of files
  • Running iterative loop command
  • Analysis and preparation of results

DAY 7- SESSION 7- PYRx

  • Installation of software
  • Downloading protein
  • Downloading ligands
  • Preparation of protein in DSV
  • Preparation and minimization of ligands in pyrx
  • Conversion of proteins and ligands to pdbqt
  • Docking in pyrx by vina wizard
  • Analysis in DSV

DAY 8- SESSION 8

  • Protein-peptide docking by HPepDock
  • Protein-protein conjugate docking by Hex
  • Protein-metal based ligand docking by Hex

WHO SHOULD ATTEND

Student & Faculty: Bachelor, Masters, Ph.D., students as well as Faculty and Professors from Microbiology, Biochemistry, Biotechnology, Immunology, Pharmacy, Pharmaceutical Chemistry, Biomedical Technology, Genetics, Bioinformatics, Plant Science and Life Sciences. Professionals: Biotechnology, Bioinformatics and Pharmaceutical scientists from industry, academia, and regulatory agencies. Hands-on exercises will be performed individually using software tools (no prior experience required).
T & C
  • It is recommended to provide GMAIL ID for registration as the recorded video session will be provided on YouTube.
  • Kindly provide that email ID by which you use YouTube.
  • Interactive training sessions will be conducted on Google Meet/Zoom to give users a better learning experience.
  • As it is with a LIVE TRAINER hence practical application, i.e., the experiments/tasks to be performed can be done in the best explainable manner.
  • In this Online Workshop, there will be a LIVE trainer who will solve queries along with training.
  • Video recording of steps will be provided at the end of the session to give the user a unique learning experience.
  • Make sure you register under the right category. If you register under the wrong category then your registration will be invalid and NO REFUND WILL BE MADE IN THIS CASE. This is your mistake and the company is not responsible for it.
  • To avoid this do read the description of the ticket before selecting and proceeding with payment. You should also read the Terms & Conditions page as well as the FAQs page.
  • You need to upload your professional ID which can be your Student ID Card or Research Institute ID Card or Company ID Card.
  • BDG Lifesceiences (OPC) Private Limited is registered under Ministry of MSME(Micro, Small and Medium Enterprises), Government of India with Registration Number:UDYAM-UP-01-0019151 hence the certificate will be provided of it. 
  • The certificate will be issued as per the details which you will provide in the registration form while registering before payment.
  • Once you register, relax we will send you the meeting link after the workshop registration gets over.
  • The program is SELF-PACED.
  • After each session video of that particular session will be shared with you so you can go through as many times as you want and perfect yourself in the topics & tasks.
  • If you miss any session then NO PROBLEM you can still perform the tasks by going through the video of that particular session.
  • We want to make sure that you learn properly hence the training certificate will be given ONLY on successful completion of all the tasks given by the trainer.
  • The certificates of all our Online programs are sent by email(softcopy) which has a unique barcode. You can take a print of that on heavy cardstock or photo paper and get it laminated if required.
  • The registration is NON-REFUNDABLE and NON-TRANSFERABLE.
  • BDG Lifesciences (OPC) Pvt. Ltd., India reserves the right of admission in all our programs.
  • If you are removed or your registration is canceled then there will be no answer to that. We have our own reasons for such an act of ours
  • If we do not wish to give this workshop to any participant then we will refund their amount. 
  • You should also read the Terms & Conditions page as well as the FAQs page.