INTRODUCTION
BDG LifeSciences is a distinguished bioinformatics company established in 2010 and operates globally. Headquartered in India the company specializes in facilitating workshops, training programs, novel & innovative research projects, and online courses in technologies of bioinformatics & life science. The company is registered under the Ministry of MSME (Micro, Small, and Medium Enterprises), Government of India, with the registration number UDYAM-UP-01-0019151. In January 2024 BDG Lifesciences, India has authorized BBR Group Pty Ltd., Australia (ACN 608 550 849), to operate its programs in Australia & New Zealand.
With a focus on practical application of technology, where participants work on their own computer/laptop on software/servers, BDG LifeSciences has been a leader in the sector for the last 15 years. Since its inception, BDG LifeSciences has successfully educated a diverse range of participants globally, including students, scientists, faculty members, professors, and corporate executives.
To provide a more personalized and effective learning experience, we are now offering our 10-Day One-on-One Training in MD Simulations | Insights of Computational Biophysics using GROMACS, NAMD & VMD on Linux & Windows OS. This exclusive program is designed for a single individual, ensuring dedicated attention and tailored guidance throughout. Each day, a 60-90 minute interactive session will be conducted via Google Meet or Zoom, allowing for in-depth discussions and hands-on learning at your own pace. Session recordings will be shared for future reference and continued practice. Upon successful completion of the course, a Participation Certificate will be awarded.
FOR SCHEDULE, WHICH TOPICS AND PRACTICAL APPLICATION WILL BE DONE PLEASE SEE THE IMAGE SECTION
OPERATING SYSTEM
WINDOWS 10 WITH I3 OR ABOVE PROCESSOR
Learning Objectives
Upon completion of this training, participants will:
- Understand the principles of molecular dynamics and the importance of protein-ligand interactions.
- Gain hands-on expertise with GROMACS to simulate protein-ligand complexes.
- Learn how to set up protein and ligand structures for MD simulations.
- Understand how to create force fields, run simulations, and analyze findings to determine binding affinity and stability.
- Be able to simulate protein-ligand binding to determine the most stable conformations.
- Know how to evaluate important simulation data such as RMSD (Root Mean Square Deviation), RMSF (Root Mean Square Fluctuation), and energy profiling.
Methodology
The program will be conducted in interactive sessions, with a focus on practical training with GROMACS to simulate protein-ligand interactions. This methodology includes:
- Introduction to MD Simulations: An overview of molecular dynamics, force fields, and the significance of simulating protein-ligand interactions.
- Software Setup: Participants will learn how to set up and operate GROMACS on their computer.
- Preparing inputs: Practical training on creating protein structures, ligands, and systems for MD simulations, including tools for protein-ligand docking and setup.
- Simulation Process: Step-by-step instructions for setting up, executing, and troubleshooting MD simulations of protein-ligand complexes with GROMACS.
- Post-Simulation Analysis: Participants will learn how to analyse simulation findings with software such as VMD (Visual Molecular Dynamics), PyMOL, and other visualisation tools. RMSD, RMSF, and energy estimations are some of the Key outputs which will be explored..
- Case Study Application: In a practical case study, participants will be able to apply their knowledge to simulate an actual protein-ligand interaction.
The lessons will include a mix of theory, practical demonstrations, and hands-on experience to ensure a balanced approach to learning.
Target Audience for This Program
This program is suitable for:
- Students & Faculty: Bachelor's, Master's, and Ph.D. students, as well as faculty members from fields such as Microbiology, Biochemistry, Biotechnology, Immunology, Pharmacy, Pharmaceutical Chemistry, Biomedical Technology, Genetics, Bioinformatics, Plant Science, and Life Sciences.
- Industry Professionals: Scientists and researchers from biotechnology, bioinformatics, and pharmaceutical industries, academia, and regulatory agencies.
- Beginners & Experienced Researchers: No prior experience is required, as the program covers both fundamental and advanced molecular docking techniques.
Why You Should Attend
- Comprehensive Learning: Gain theoretical knowledge and practical experience in molecular docking techniques.
- Live Training & Interaction: Learn from expert trainers in real-time with the ability to ask questions and solve queries instantly.
- Self-Paced Flexibility: Get access to recorded video sessions to review and practice at your convenience.
- Industry-Relevant Training: Equip yourself with skills that are directly applicable in research, drug discovery, and structural biology.
- Globally Recognized Certification: Receive a technical certificate from BDG LifeSciences upon successful completion.
Practical Takeaways
After attending this workshop, participants will be able to:
1. Comprehensive skills in MD simulations
- GROMACS-based molecular dynamics simulations can be performed independently.
- Ability to prepare, conduct, and analyze MD simulations for biomolecular systems.
- Confident in troubleshooting frequent errors that arise during MD simulations.
2. Experience with Real-World Applications.
Participants will get practical insights into how MD simulations are used in:
- Structural Biology: Understanding of protein folding, misfolding and conformational changes.
- Biotechnology: Developing biomolecules for industrial and therapeutic uses.
- Genetic research: Involves studying the consequences of genetic changes on molecular structures.
3. Resources & Support
- Students have access to all course resources, including tutorials, guides, and case studies.
- Video records of all sessions are kept for future reference.
- Certificates of participation give significance to your academic or professional profile.
Why You Should Attend
1. Learn from Experts: Our instructors have extensive expertise of MD simulations and practical applications in drug development and structural biology.
2. Interactive sessions: GROMACS, the industry's top molecular dynamics software, provides hands-on training and practical demonstrations.
3. Real-world Applications: Focus on simulating protein-ligand interactions using real-life scenarios from drug discovery and structural biology.
4. Hands-on Support: Direct, interactive learning with experts guiding you through each step of the process.
5. Networking opportunities: Engage with professionals and researchers from across the world, growing your network in the field of bioinformatics and computational biology.
For More Information
Take your research to the next level
Don't miss this opportunity to immerse yourself in the world of Molecular Dynamics Simulations and learn how to simulate protein-ligand interactions with GROMACS. Improve your abilities and stay competitive in the fields of bioinformatics and computational biology!
Why Choose BDG LifeSciences for this Training?
BDG LifeSciences is a pioneer in innovative and creative learning programs, consistently introducing courses on cutting-edge topics. This training is meticulously designed to meet industry demands, providing participants with a blend of theoretical insights and practical skills. With expert-led sessions, hands-on exercises, and post-training support, BDG LifeSciences ensures a comprehensive and enriching learning experience tailored to the latest advancements in AI and drug discovery.
Registration Fee
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For all Participants
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$ 699 (Australian)
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How To Register
To secure your spot:
- Click on Register Now button and proceed.
- After registering, please email to info@bdglifesciences.com with your preferred start date and choose one of the following time slots: 6:30 AM–8:30 AM India time or 8:30 PM–10:30 PM India time.
- Kindly note that the time of the sessions will be 90-120 minutes every day.
- Once you register, please allow us 2-5 working days to make your training schedule, i.e. dates and time.
- For any further queries, feel free to email us at info@bdglifesciences.com
Previous Events & Testimonials
Gain insight into our past trainings:
- Video Feedback: Visit our YouTube channel for testimonials.
- Upcoming Training Programs: Explore other upcoming events here.
- Upcoming Online Workshops: Explore other upcoming events here.
To get regular updates on Upcoming Job opportunities, Research Projects, Courses, Training and Trainings, kindly join our WhatsApp Channel / Telegram
T & C
- Please provide a GMAIL ID for registration as the recorded video session will be provided on YouTube. Kindly provide that email ID by which you use YouTube.
- Since the training is a one-on-one live session with a trainer on Zoom, you'll need to attend, allowing for practical hands-on learning, real-time explanations, and direct query resolution for a better learning experience.
- At the end of each session, you will receive a video recording, allowing you to review the steps as many times as needed to enhance your learning and master the topics and tasks.
- BDG Lifesceiences (OPC) Private Limited is registered under Ministry of MSME(Micro, Small and Medium Enterprises), Government of India with Registration Number:UDYAM-UP-01-0019151 hence the certificate will be provided of it. BBR Group Pty Ltd, Australia (ACN-Australian Company Number-608 550 849) has the franchisee of BDG Lifesciences to run its programs in Australia & New Zealand.
- The certificate will be issued as per the details which you will provide in the registration form while registering before payment.
- We want to make sure that you learn properly hence the training certificate will be given ONLY on successful completion of all the tasks given by the trainer.
- The certificates of all our Online programs are sent by email (softcopy) which has a unique barcode. You can take a print of that on heavy cardstock or photo paper and get it laminated if required.
- The registration is NON-REFUNDABLE and NON-TRANSFERABLE.
- BDG Lifesciences (OPC) Pvt. Ltd., India and BBR Group Pty Ltd Australia reserve the right of admission in all our programs.
- If you are removed or your registration is canceled then there will be no answer to that. We have our own reasons for such an act of ours. If we do not wish to give this training to any participant then we will refund their amount.
- You should also read the Terms & Conditions page as well as the FAQs page. For any assistance kindly chat with our AI Assistant BioBot on the website www.bdglifesciences.com
