BDG LifeSciences is a distinguished bioinformatics company established in 2010 and operates globally. Headquartered in India the company specializes in facilitating workshops, training programs, novel & innovative research projects, and online courses in technologies of bioinformatics & life science. The company is registered under the Ministry of MSME (Micro, Small, and Medium Enterprises), Government of India, with the registration number UDYAM-UP-01-0019151. Recently, BDG Lifesciences, India has authorized BBR Group Pty Ltd., Australia (ACN 608 550 849), to operate its programs in Australia & New Zealand. With a focus on practical application of technology, where participants work on their own computer/laptop on software/servers, BDG LifeSciences has been a leader in the sector for the last 14 years. Since its inception, BDG LifeSciences has successfully educated a diverse range of participants globally, including students, scientists, faculty members, professors, and corporate executives. Now advancing in the technology we have launched a 5-day complete hands-on Online Training Program in R Programming for Biologists. INTRODUCTION This intensive course is designed to provide participants with a comprehensive understanding this cutting-edge skill and it's practical applications in biological research.. Video recording of each session will be provided at the end of the session to give the user a unique learning experience. On successful completion of the course participation certificate will be awarded. TOPICS Introduction Microarray &RNA-Seq data retrieval Data pre-processing and cleaning Differential gene expression analysis Meta-analysis of multiple datasets Non-trait based WGCNA Trait-based WGCNA Protein-protein Interaction (PPI) network construction & analysis 3-node Feed-forward loop (FFL) network construction & analysis Kaplan-Meier (KM) survival analysis Mutational & tumor infiltration analysis PRACTICAL APPLICATION Understanding microarray & RNA-Seq data Understanding the pre-processing to advanced level Gene expression in two different conditions or sample groups Meta-analysis of more than two datasets Understanding gene co-expression network and dynamics Understanding the PPI network and dynamics Understanding the FFL network and dynamics Understanding overall survival (OS) & relapse-free survival (RFS) Mutational & Tumor infiltration analysis OUTCOME OF THIS PROGRAM: Participants will learn Various statical methods of normalization and pre-processing How differentially expressed genes can classified as oncogenes or tumor suppressors? Data interpretation How to handle multiple datasets at once? Hub co-expressed gene modules within gene co-expression network Pathways and enrichment analysis of hub module genes Driver miRNAs & TFs linked with hub module genes PPI network module and network characteristics Log-rank test Understand OS & RFS KM plots Mutational, tumor infiltration, & stage plot analysis SCHEDULE Day 1 [60-90 mins]: Theory session including introduction to Microarray & RNA-Seq data types, pre-processing algorithms, QC plots understanding, biological networks, algorithms, and graph characteristics. Installing all the software, packages, and pre-requisites before starting. Day 2 [60-90 mins]: Microarray & RNA-Seq data analysis and DEGs identification Day 3 [60-90 mins]: Gene co-expression network construction via WGCNA (non-trait & trait-based) Day 4 [60-90 mins]: PPI network construction and analysis and Plotting of KM plots with TCGA data Day 5 [60-90 mins]: Mutational, tumor infiltration, & meta-analysis SYSTEM REQUIREMENT Any OS (Windows/Mac/Ubuntu) with internet connection R 4.3.3 RStudio Rtools44 Cytoscape v3.10.1 PRE-REQUISITES: limma DESeq2 ggplot2 NOISeq WGCNA SURVMINER TARGET AUDIENCE Student: Bachelor, Masters, PhD, MBBS, MD students as well as Faculty and Professors from Microbiology, Biochemistry, Biotechnology, Immunology, Medicine, Pharmacy, Pharmaceutical Chemistry, Biomedical Technology, Genetics, Bioinformatics, Plant Science and Life Sciences. Professionals: Resident Doctors, Biotechnology, Bioinformatics, Medicine and Pharmaceutical scientists from industry, academia, and regulatory agencies. Hands-on exercises will be performed individually using software tools on your own laptops. (no prior experience required). RESOURCE PERSON Ashish Kumar Choudhary, a Technical Associate at BDG Lifesciences and a graduate of the Indian Institute of Technology (IIT) Bombay, specializes in bioinformatics, sequencing data analysis, and computational biology. With expertise in scRNA-Seq, spatial transcriptomics, RNA-Seq, and DNA-Seq, Ashish excels in building optimized pipelines and solving complex problems using R, Python, and C programming. His academic and professional experiences, including hands-on research at the National Centre for Microbial Resource in Pune, reflect his strong foundation in genomics, next-generation sequencing, and metagenomics. Dedicated to leveraging genomics data for biomedical advancements, Ashish conducts impactful workshops, training sessions, and research projects aimed at addressing challenges in precision medicine. REGISTRATION STEPS: Click on register tab. This will take you to this link- https://events.humanitix.com/bdg-lifesciences-training-programs/tickets You will see the Training Programs and their fee, scroll down to see the list of all available training programs. For the training which you want to register, click 1 for 1 participant, 2 for 2 participants and so on and then click Continue. Fill in the required attendee information and proceed to payment. Complete the payment process, and you will receive your registration/ticket via email. T & C After registering, please email to info@bdglifesciences.com with your preferred start date and choose one of the following time slots: 6:30 AM–8:00 AM India time or 9:30 PM–11:00 PM India time. Kindly note that the time of the sessions will be 60-90 minutes everyday. Once you register, please allow us 2-5 working days to make your training schedule,i.e. dates and time. Please provide a GMAIL ID for registration as the recorded video session will be provided on YouTube. Kindly provide that email ID by which you use YouTube. Since the training is a one-on-one live session with a trainer on Zoom, you'll need to attend, allowing for practical hands-on learning, real-time explanations, and direct query resolution for a better learning experience. At the end of each session, you will receive a video recording, allowing you to review the steps as many times as needed to enhance your learning and master the topics and tasks. BDG Lifesceiences (OPC) Private Limited is registered under Ministry of MSME(Micro, Small and Medium Enterprises), Government of India with Registration Number:UDYAM-UP-01-0019151 hence the certificate will be provided of it. BBR Group Pty Ltd, Australia (ACN-Australian Company Number-608 550 849) has the franchisee of BDG Lifesciences to run its programs in Australia & New Zealand. The certificate will be issued as per the details which you will provide in the registration form while registering before payment. We want to make sure that you learn properly hence the training certificate will be given ONLY on successful completion of all the tasks given by the trainer. The certificates of all our Online programs are sent by email(softcopy) which has a unique barcode. You can take a print of that on heavy cardstock or photo paper and get it laminated if required. The registration is NON-REFUNDABLE and NON-TRANSFERABLE. BDG Lifesciences (OPC) Pvt. Ltd., India and BBR Group Pty Ltd Australia reserves the right of admission in all our programs. If you are removed or your registration is canceled then there will be no answer to that. We have our own reasons for such an act of ours. If we do not wish to give this workshop to any participant then we will refund their amount. To view the pictures of our previous events click here-1 and click here-2. To view, the listing of upcoming events kindly click here and our previous workshops can be viewed here. To view the video feedback of our previous events kindly visit our YouTube Channel You should also read the Terms & Conditions page as well as the FAQs page. For any assistance kindly chat with our AI Assistant BioBot on the website www.bdglifesciences.com