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BDG LifeSciences is a distinguished bioinformatics company established in 2010 and operates globally. Headquartered in India the company specializes in facilitating workshops, training programs, novel & innovative research projects, and online courses in technologies of bioinformatics & life science. The company is registered under the Ministry of MSME (Micro, Small, and Medium Enterprises), Government of India, with the registration number UDYAM-UP-01-0019151. Recently, BDG Lifesciences, India has authorized BBR Group Pty Ltd., Australia (ACN 608 550 849), to operate its programs in Australia & New Zealand.
With a focus on practical application of technology, where participants work on their own computer/laptop on software/servers, BDG LifeSciences has been a leader in the sector for the last 14 years. Since its inception, BDG LifeSciences has successfully educated a diverse range of participants globally, including students, scientists, faculty members, professors, and corporate executives.
We have launched our 10-day Online Technical Training in Next Generation Sequencing | Spatial Transcriptomics Analysis on Windows, Linux & Mac OS. It will be an extensive 10-day training program in which every day 60 minutes interactive training sessions will be conducted to give the user a unique learning experience. VIDEO RECORDING WILL BE PROVIDED. On successful completion of the course participation certificate will be awarded.
As it is 100% hands-on training program participants will run the processes on their own computer systems having Windows/ Mac/ Linux with a unique learning experience. The program will be of great help to students/ researchers/ faculty/ pathologists/ scientists in learning this latest technology.
WHY THIS COURSE IS IMPORTANT?
Spatial transcriptomics has become essential for biomedical research, particularly in developmental biology, cancer, immunology, and neuroscience. To understand normal development and disease pathology, it is crucial to understand the relationship between cells and their relative locations within tissues. With the use of spatial transcriptomics, a cutting-edge technique in molecular profiling, researchers may map the locations of all the genes active in a tissue sample and assess each gene's activity. The position of any given cell, relative to its neighbours and non-cellular structures, can provide helpful information for defining cellular phenotype, cell state, and ultimately cell and tissue function. Location can determine the signals to which cells are exposed. Spatial transcriptomics techniques use intact tissue sections, spatial barcoding, or in situ hybridization to retain positional information. Scientists are already using this technology to assist them in comprehending biological processes and diseases since it is yielding fresh findings..
Research Highlights using Spatial Transcriptomics Analysis
SCHEDULE
DAY |
MODULE |
TOPICS |
1 |
Module 1: Introduction to NGS |
|
2 |
Module 2: Genomics file format |
|
3 |
Module 3: Introduction to spatial transcriptomics |
|
4 |
Module 4: Linux command line and shell scripting |
|
5 |
Module 5:10X Visium technology |
|
6 |
Module 6: Seurat Object |
|
7 |
Module 7:Quality control |
|
8 |
Module 8: Integration methods |
|
9 |
Module 9: Downstream process |
|
10 |
Module 10: Clustering and finding marker genes and cell annotation |
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SYSTEM REQUIREMENT: Any OS (Windows/Mac/Ubuntu) with internet connection
PRE-REQUISITES:
LEARNING OUTCOMES: What will I learn? After this course, you should be able to:
TARGET AUDIENCE
Student: Bachelor, Masters, PhD, MBBS, MD students as well as Faculty and Professors from Microbiology, Biochemistry, Biotechnology, Immunology, Medicine, Pharmacy, Pharmaceutical Chemistry, Biomedical Technology, Genetics, Bioinformatics, Plant Science and Life Sciences.
Professionals: Resident Doctors, Biotechnology, Bioinformatics, Medicine and Pharmaceutical scientists from industry, academia, and regulatory agencies. Hands-on exercises will be performed individually using software tools on your own laptops. (no prior experience required).
RESOURCE PERSON
Ashish Kumar Choudhary, a Technical Associate at BDG Lifesciences and a graduate of the Indian Institute of Technology (IIT) Bombay, specializes in bioinformatics, sequencing data analysis, and computational biology. With expertise in scRNA-Seq, spatial transcriptomics, RNA-Seq, and DNA-Seq, Ashish excels in building optimized pipelines and solving complex problems using R, Python, and C programming. His academic and professional experiences, including hands-on research at the National Centre for Microbial Resource in Pune, reflect his strong foundation in genomics, next-generation sequencing, and metagenomics. Dedicated to leveraging genomics data for biomedical advancements, Ashish conducts impactful workshops, training sessions, and research projects aimed at addressing challenges in precision medicine.
REGISTRATION STEPS:
T & C